THIS PACKAGE HAS BEEN RENAMED ggoutbreak AND IS NOW HOSTED HERE
Simple statistical models and visualisations for calculating the incidence, proportion, exponential growth rate, and reproduction number of infectious disease case time series. This tool kit was largely developed during the COVID-19 pandemic.
Installation
Bristol Vaccine Centre r-universe. Installation from there is as follows:
options(repos = c(
"bristol-vaccine-centre" = 'https://bristol-vaccine-centre.r-universe.dev/',
CRAN = 'https://cloud.r-project.org'))
# Download and install growthrates in R
install.packages("growthrates")You can install the development version of growthrates from GitHub with:
# install.packages("devtools")
devtools::install_github("bristol-vaccine-centre/growthrates")